Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_00091 | Not Available | Negative | 103077 - 103313 | 8813.5 |
| ankyrin repeat protein | LY11_00092 | Not Available | Negative | 103368 - 104708 | 48616.0 |
| ankyrin repeat protein | LY11_00093 | Not Available | Negative | 104721 - 105908 | 44028.1 |
| start domain-containing protein | LY11_00094 | Not Available | Negative | 105986 - 106663 | 25483.9 |
| l,d-transpeptidase-like protein | LY11_00095 | Not Available | Positive | 106896 - 107678 | 28734.3 |
| membrane-associated phospholipid phosphatase | LY11_00096 | Not Available | Positive | 107800 - 108492 | 26177.8 |
| exonuclease sbcc | LY11_00097 | Not Available | Negative | 108482 - 112159 | 138980.0 |
| exodeoxyribonuclease i subunit d | LY11_00098 | Not Available | Negative | 112156 - 113382 | 46541.2 |
| hypothetical protein | LY11_00099 | Not Available | Negative | 113442 - 113870 | 15882.1 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | LY11_00100 | Not Available | Negative | 114345 - 115757 | 51048.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

