Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase | LY11_01427 | Not Available | Positive | 1616464 - 1617384 | 34573.2 |
| d-tyrosyl-trna(tyr) deacylase | LY11_01428 | Not Available | Positive | 1617391 - 1617843 | 16355.8 |
| ntp pyrophosphatase (non-canonical ntp hydrolase) | LY11_01429 | Not Available | Positive | 1617844 - 1618170 | 12326.7 |
| histidine triad (hit) family protein | LY11_01430 | Not Available | Negative | 1618205 - 1618597 | 14283.7 |
| transcription elongation factor grea | LY11_01431 | Not Available | Negative | 1618607 - 1619080 | 17178.7 |
| hypothetical protein | LY11_01432 | Not Available | Positive | 1619415 - 1621292 | 71350.8 |
| uncharacterized protein duf3999 | LY11_01433 | Not Available | Negative | 1621335 - 1622582 | 47087.0 |
| putative membrane protein duf2339 | LY11_01434 | Not Available | Negative | 1622560 - 1625040 | 93341.9 |
| crp-like camp-binding protein | LY11_01435 | Not Available | Positive | 1625201 - 1625782 | 22726.4 |
| hypothetical protein | LY11_01436 | Not Available | Positive | 1625863 - 1627368 | 53859.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

