Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system porp/sprf family membrane protein | LY11_01376 | Not Available | Negative | 1552975 - 1553970 | 35778.4 |
| gliding motility-associated-like protein | LY11_01377 | Not Available | Negative | 1554000 - 1563926 | 336563.0 |
| hypothetical protein | LY11_01378 | Not Available | Positive | 1564263 - 1566773 | 98394.5 |
| subtilase family protein | LY11_01379 | Not Available | Negative | 1566839 - 1568446 | 58008.3 |
| uroporphyrin-iii c-methyltransferase | LY11_01380 | Not Available | Negative | 1568637 - 1569428 | 28244.2 |
| badm/rrf2 family transcriptional regulator | LY11_01381 | Not Available | Negative | 1569516 - 1569953 | 16208.0 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | LY11_01382 | Not Available | Negative | 1570004 - 1571230 | 48136.4 |
| hypothetical protein | LY11_01383 | Not Available | Negative | 1571300 - 1571545 | 9309.82 |
| hypothetical protein | LY11_01384 | Not Available | Positive | 1571780 - 1572247 | 16382.3 |
| two-component system response regulator hydg | LY11_01385 | Not Available | Positive | 1572342 - 1573670 | 49688.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

