Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | LY11_01366 | Not Available | Positive | 1542655 - 1543968 | 48639.4 |
| n-acetylglucosamine kinase-like badf-type atpase | LY11_01367 | Not Available | Positive | 1543986 - 1544837 | 32058.2 |
| acetyltransferase (gnat) family protein | LY11_01368 | Not Available | Negative | 1545066 - 1545479 | 15722.1 |
| hypothetical protein | LY11_01369 | Not Available | Negative | 1545804 - 1546274 | 16930.4 |
| putative secreted protein (por secretion system target) | LY11_01370 | Not Available | Positive | 1546437 - 1548413 | 70800.1 |
| gaf domain-containing protein | LY11_01371 | Not Available | Negative | 1548425 - 1548928 | 18842.8 |
| nadp-dependent alcohol dehydrogenase | LY11_01372 | Not Available | Negative | 1549067 - 1550227 | 42829.4 |
| hypothetical protein | LY11_01373 | Not Available | Negative | 1550291 - 1550479 | 7377.7 |
| two-component system alkaline phosphatase synthesis response regulator phop/two-component system response regulator vicr | LY11_01374 | Not Available | Positive | 1550529 - 1550933 | 15637.5 |
| wd40 repeat protein | LY11_01375 | Not Available | Negative | 1550962 - 1552965 | 75502.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

