Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylation response protein aidb-like acyl-coa dehydrogenase | LY11_01356 | Not Available | Negative | 1525895 - 1527685 | 65703.2 |
| acetyl-coa acyltransferase | LY11_01357 | Not Available | Negative | 1527764 - 1528942 | 41442.3 |
| 3-hydroxyacyl-coa dehydrogenase | LY11_01358 | Not Available | Negative | 1529030 - 1531435 | 88892.4 |
| dna-binding marr family transcriptional regulator | LY11_01359 | Not Available | Negative | 1531416 - 1531874 | 17012.3 |
| oop family ompa-ompf porin | LY11_01360 | Not Available | Negative | 1531994 - 1533328 | 47506.4 |
| long-chain acyl-coa synthetase | LY11_01361 | Not Available | Negative | 1533589 - 1535367 | 66787.6 |
| hypothetical protein | LY11_01362 | Not Available | Positive | 1535879 - 1536358 | 17409.7 |
| putative metalloprotease with pdz domain | LY11_01363 | Not Available | Negative | 1536443 - 1538230 | 65661.3 |
| membrane fusion protein (multidrug efflux system) | LY11_01364 | Not Available | Positive | 1538476 - 1539465 | 34895.2 |
| multidrug efflux pump | LY11_01365 | Not Available | Positive | 1539480 - 1542593 | 114246.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

