Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | LY11_01326 | Not Available | Positive | 1491678 - 1492547 | 33799.8 |
| transposase | LY11_01327 | Not Available | Positive | 1493295 - 1493582 | 11174.4 |
| Trna-asn | Not Available | Not Available | Positive | 1493731 - 1493807 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 1493928 - 1494001 | Not Available |
| sugar/nucleoside kinase (ribokinase family) | LY11_01330 | Not Available | Positive | 1494147 - 1495070 | 33825.7 |
| putative heme/steroid binding protein | LY11_01331 | Not Available | Negative | 1495145 - 1495381 | 8975.56 |
| lycopene cyclase domain-containing protein | LY11_01332 | Not Available | Negative | 1495381 - 1496058 | 26564.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_01333 | Not Available | Negative | 1496301 - 1496831 | 20403.7 |
| udp-n-acetylmuramate dehydrogenase | LY11_01334 | Not Available | Negative | 1497024 - 1498040 | 37498.0 |
| tetr family transcriptional regulator | LY11_01335 | Not Available | Positive | 1498120 - 1498803 | 26236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

