Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase-like glycosyl hydrolase | LY11_01316 | Not Available | Positive | 1475777 - 1477480 | 62732.6 |
| nitric oxide dioxygenase | LY11_01317 | Not Available | Negative | 1477549 - 1478760 | 45105.9 |
| badm/rrf2 family transcriptional regulator | LY11_01318 | Not Available | Positive | 1478975 - 1479415 | 16043.5 |
| thioredoxin-like protein | LY11_01319 | Not Available | Negative | 1479417 - 1479947 | 19365.2 |
| atp-dependent exodnase (exonuclease v) beta subunit | LY11_01320 | Not Available | Positive | 1480043 - 1483279 | 122201.0 |
| exodeoxyribonuclease v gamma subunit | LY11_01321 | Not Available | Positive | 1483296 - 1486205 | 110658.0 |
| pyruvate dehydrogenase e1 component beta subunit | LY11_01322 | Not Available | Positive | 1486311 - 1487297 | 36133.9 |
| uncharacterized protein | LY11_01323 | Not Available | Positive | 1487443 - 1489752 | 85063.3 |
| hypothetical protein | LY11_01324 | Not Available | Negative | 1489763 - 1490152 | 14689.3 |
| emrb/qaca subfamily drug resistance transporter | LY11_01325 | Not Available | Negative | 1490156 - 1491592 | 51659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

