Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | LY11_01286 | Not Available | Positive | 1446472 - 1447290 | 28340.7 |
| acetylornithine deacetylase | LY11_01287 | Not Available | Positive | 1447294 - 1448361 | 39060.6 |
| argininosuccinate lyase | LY11_01288 | Not Available | Positive | 1448403 - 1449734 | 49829.4 |
| aspartate aminotransferase | LY11_01289 | Not Available | Positive | 1449761 - 1451014 | 45589.8 |
| hypothetical protein | LY11_01290 | Not Available | Negative | 1451081 - 1451248 | 5895.49 |
| peptide chain release factor 3 | LY11_01291 | Not Available | Negative | 1451472 - 1453052 | 59912.6 |
| hypothetical protein | LY11_01292 | Not Available | Negative | 1453148 - 1454821 | 64933.0 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | LY11_01293 | Not Available | Positive | 1455183 - 1455890 | 26363.0 |
| nicotinate-nucleotide adenylyltransferase | LY11_01294 | Not Available | Negative | 1455899 - 1456474 | 21904.4 |
| guanylate kinase | LY11_01295 | Not Available | Negative | 1456493 - 1457062 | 21762.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

