Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit d | LY11_01216 | Not Available | Positive | 1375912 - 1376496 | 21493.8 |
| tetr family transcriptional regulator | LY11_01217 | Not Available | Positive | 1376635 - 1377246 | 23164.1 |
| outer membrane protein tolc | LY11_01218 | Not Available | Positive | 1377283 - 1378656 | 51135.1 |
| rnd family efflux transporter mfp subunit | LY11_01219 | Not Available | Positive | 1378675 - 1379751 | 38335.8 |
| multidrug efflux pump subunit acrb | LY11_01220 | Not Available | Positive | 1379748 - 1382816 | 112742.0 |
| phosphoenolpyruvate carboxylase type 1 | LY11_01221 | Not Available | Negative | 1382875 - 1385463 | 98643.0 |
| dha2 family multidrug resistance protein | LY11_01222 | Not Available | Negative | 1385688 - 1387235 | 56150.7 |
| membrane fusion protein (multidrug efflux system) | LY11_01223 | Not Available | Negative | 1387240 - 1388304 | 38393.8 |
| outer membrane protein tolc | LY11_01224 | Not Available | Negative | 1388324 - 1389619 | 48069.4 |
| tetr family transcriptional regulator | LY11_01225 | Not Available | Negative | 1389637 - 1390257 | 23136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

