Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein tsae | LY11_01196 | Not Available | Negative | 1355258 - 1355680 | 15895.9 |
| response regulator receiver domain-containing protein | LY11_01197 | Not Available | Negative | 1355690 - 1357243 | 60466.4 |
| hypothetical protein | LY11_01198 | Not Available | Positive | 1357339 - 1358577 | 47133.5 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | LY11_01199 | Not Available | Positive | 1358714 - 1359760 | 37333.5 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | LY11_01200 | Not Available | Positive | 1359787 - 1361199 | 52258.8 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | LY11_01201 | Not Available | Positive | 1361196 - 1361981 | 28382.1 |
| abc-type multidrug transport system atpase subunit | LY11_01202 | Not Available | Positive | 1361990 - 1362607 | 23189.7 |
| elongation factor p | LY11_01203 | Not Available | Positive | 1362764 - 1363324 | 21254.3 |
| subtilase family protein | LY11_01204 | Not Available | Positive | 1364401 - 1365840 | 52624.0 |
| 5-formyltetrahydrofolate cyclo-ligase | LY11_01205 | Not Available | Positive | 1366354 - 1366920 | 21929.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

