Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_01176 | Not Available | Negative | 1330387 - 1331319 | 35081.8 |
| nifr3 family tim-barrel protein | LY11_01177 | Not Available | Positive | 1331373 - 1332380 | 38047.2 |
| apag protein | LY11_01178 | Not Available | Positive | 1332425 - 1332811 | 14613.1 |
| hypothetical protein | LY11_01179 | Not Available | Negative | 1332808 - 1333503 | 25966.6 |
| dna recombination protein rmuc | LY11_01180 | Not Available | Positive | 1333811 - 1335133 | 50488.7 |
| thiamine-monophosphate kinase | LY11_01181 | Not Available | Negative | 1335128 - 1336168 | 38113.7 |
| quinolinate synthetase | LY11_01182 | Not Available | Negative | 1336278 - 1337270 | 36907.6 |
| hypothetical protein | LY11_01183 | Not Available | Negative | 1337432 - 1337563 | 5204.46 |
| l-aspartate oxidase | LY11_01184 | Not Available | Positive | 1337669 - 1339255 | 59086.6 |
| carbonic anhydrase/acetyltransferase-like protein (isoleucine patch superfamily) | LY11_01185 | Not Available | Positive | 1339268 - 1339777 | 18178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

