Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LY11_01086 | Not Available | Positive | 1217230 - 1218390 | 44521.0 |
| susd-like starch-binding protein associating with outer membrane | LY11_01087 | Not Available | Negative | 1218450 - 1219937 | 54994.1 |
| tonb-linked susc/raga family outer membrane protein | LY11_01088 | Not Available | Negative | 1219951 - 1223133 | 115203.0 |
| histidine kinase | LY11_01089 | Not Available | Positive | 1223556 - 1224665 | 43146.9 |
| lyttr family two component transcriptional regulator | LY11_01090 | Not Available | Positive | 1224672 - 1225430 | 29127.3 |
| membrane fusion protein (multidrug efflux system) | LY11_01091 | Not Available | Positive | 1225551 - 1226759 | 43344.4 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_01092 | Not Available | Positive | 1226817 - 1229948 | 113441.0 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | LY11_01093 | Not Available | Positive | 1229970 - 1231379 | 51252.0 |
| uncharacterized membrane-anchored protein yitt (duf2179 family) | LY11_01094 | Not Available | Positive | 1231486 - 1232331 | 30413.9 |
| peptidase s41-like protein | LY11_01095 | Not Available | Negative | 1232370 - 1233767 | 52578.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

