Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | LY11_00051 | Not Available | Negative | 60173 - 60769 | 22985.9 |
| c-terminal processing protease ctpa/prc | LY11_00052 | Not Available | Negative | 60849 - 62216 | 49924.6 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | LY11_00053 | Not Available | Positive | 62361 - 63212 | 32430.4 |
| stress responsive alpha/beta barrel protein | LY11_00054 | Not Available | Positive | 63209 - 63637 | 15714.0 |
| putative arsr family transcriptional regulator | LY11_00055 | Not Available | Negative | 63649 - 64260 | 22581.1 |
| uncharacterized protein duf2480 | LY11_00056 | Not Available | Positive | 64611 - 65120 | 19744.3 |
| membrane fusion protein (multidrug efflux system) | LY11_00057 | Not Available | Positive | 65132 - 66259 | 40884.1 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LY11_00058 | Not Available | Positive | 66268 - 69426 | 113947.0 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | LY11_00059 | Not Available | Positive | 69447 - 70841 | 51135.1 |
| peptide-methionine (r)-s-oxide reductase | LY11_00060 | Not Available | Positive | 70923 - 71366 | 16785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

