Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryoconitis |
| Strain | strain DSM 14825 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845608 bp
Thymine Count
1836762 bp
Guanine Count
1187658 bp
Cytosine Count
1204992 bp
Genome Length
6080251 bp
Protein-coding Genes
5224 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | LY11_00965 | Not Available | Negative | 1066592 - 1068145 | 58182.0 |
| tonb-linked susc/raga family outer membrane protein | LY11_00966 | Not Available | Negative | 1068203 - 1071277 | 111876.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | LY11_00967 | Not Available | Negative | 1071285 - 1072805 | 56172.3 |
| aldose 1-epimerase | LY11_00968 | Not Available | Negative | 1073330 - 1074511 | 42880.9 |
| adp-ribose pyrophosphatase yjhb (nudix family) | LY11_00969 | Not Available | Positive | 1074642 - 1075352 | 27285.2 |
| l-ribulokinase | LY11_00970 | Not Available | Positive | 1075753 - 1077453 | 62001.2 |
| l-ribulose-5-phosphate 4-epimerase | LY11_00971 | Not Available | Positive | 1077450 - 1078148 | 25947.8 |
| l-arabinose isomerase | LY11_00972 | Not Available | Positive | 1078172 - 1079662 | 55471.5 |
| sss family solute:na+ symporter | LY11_00973 | Not Available | Positive | 1079699 - 1081384 | 61212.4 |
| chey-like chemotaxis protein | LY11_00974 | Not Available | Negative | 1081440 - 1082147 | 26199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

