Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | DNR41_26920 | Not Available | Positive | 5102680 - 5103584 | 33592.1 |
| Trna-phe | Not Available | Not Available | Positive | 5103603 - 5103678 | Not Available |
| duf4102 domain-containing protein | DNR41_26930 | Not Available | Positive | 5103876 - 5104480 | 23003.0 |
| inovirus gp2 family protein | DNR41_26935 | Not Available | Positive | 5104481 - 5104900 | 15981.1 |
| site-specific dna-methyltransferase | DNR41_26940 | Not Available | Positive | 5105319 - 5106003 | 25790.8 |
| Trna-met | Not Available | Not Available | Positive | 5106053 - 5106125 | Not Available |
| phage portal protein | DNR41_26950 | Not Available | Positive | 5106127 - 5106315 | 7388.47 |
| s49 family peptidase | DNR41_26955 | Not Available | Positive | 5106305 - 5106930 | 22165.1 |
| hypothetical protein | DNR41_26960 | Not Available | Positive | 5106931 - 5107119 | 7331.41 |
| s49 family peptidase | DNR41_26965 | Not Available | Positive | 5107109 - 5107734 | 22145.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





