Escherichia coli strain CG1MAC

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CG1MAC is a Gram-negative, rod-shaped bacterium that displays mobility due to the presence of flagella. It exists in various arrangements, including singles and pairs, and is categorized as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. This strain is mesophilic, with an optimal growth temperature of 37°C. CG1MAC demonstrates a diverse range of biotic relationships, being free-living and associated with numerous hosts, including Homo sapiens, various livestock (e.g., Gallus gallus and Bos taurus), companion animals (e.g., Canis lupus familiaris and Felis catus), and even some plant species like Solanum lycopersicum and Brassica oleracea var. italica. The health effects associated with CG1MAC are significant, as it is linked to various medical conditions such as urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. Its pathogenicity in humans underscores its role as a notable agent of infectious disease, contributing to complications like hemolytic uremic syndrome (HUS), septicemia, and foodborne infections. Given its wide range of hosts and potential health impacts, the ecological insight derived from studying E. coli CG1MAC highlights the importance of understanding microbial interactions within host organisms and the environment. This knowledge is crucial for developing strategies to manage infections and prevent the spread of pathogenic strains, particularly in clinical settings and agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CG1MAC

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CG1MAC
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CG1MAC NODE_282_length_229_cov_0.631579,

Gene Summary

Adenine Count

1277794 bp

Thymine Count

1276189 bp

Guanine Count

1322691 bp

Cytosine Count

1289142 bp

Genome Length

5165816 bp

Protein-coding Genes

4979 genes

Non-Coding Genes

342 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive718178 - 718192Not Available
IntegraseDNR41_03815Not AvailablePositive731260 - 73249847318.1
Transcriptional regulatorDNR41_03820Not AvailablePositive732918 - 7331278057.66
host cell division inhibitor icd-like proteinDNR41_03825Not AvailablePositive733138 - 73405533435.0
hypothetical proteinDNR41_03830Not AvailablePositive734048 - 7342758371.14
duf4222 domain-containing proteinDNR41_03835Not AvailablePositive734281 - 73458011456.9
Dna primaseDNR41_03840Not AvailablePositive734577 - 73632564600.3
hypothetical proteinDNR41_03845Not AvailablePositive736614 - 7368719497.21
Putative single-stranded dna-binding proteinDNR41_03850Not AvailablePositive736868 - 73729015043.8
hypothetical proteinDNR41_03855Not AvailablePositive737706 - 7379127329.92

Displaying genes 1 – 10 of 5321 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total