Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DNR41_26585 | Not Available | Positive | 5066093 - 5067223 | 43170.1 |
| outer membrane protein ompw | DNR41_26590 | Not Available | Negative | 5067269 - 5067382 | 4383.21 |
| host specificity protein j | DNR41_26595 | Not Available | Negative | 5067383 - 5068036 | 23843.1 |
| hypothetical protein | DNR41_26600 | Not Available | Positive | 5068197 - 5068382 | 6602.92 |
| tail assembly protein | DNR41_26605 | Not Available | Negative | 5068515 - 5069156 | 22500.3 |
| endopeptidase | DNR41_26610 | Not Available | Negative | 5069054 - 5069653 | 23020.2 |
| hypothetical protein | DNR41_26615 | Not Available | Positive | 5069669 - 5069941 | 10101.1 |
| lysozyme | DNR41_26620 | Not Available | Negative | 5069884 - 5070417 | 19491.3 |
| hypothetical protein | DNR41_26625 | Not Available | Positive | 5070523 - 5070795 | 10108.8 |
| duf1327 domain-containing protein | DNR41_26630 | Not Available | Negative | 5070761 - 5071105 | 12928.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





