Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | DNR41_24960 | Not Available | Positive | 4818173 - 4818598 | 15986.8 |
| type vi secretion system baseplate subunit tssf | DNR41_24965 | Not Available | Positive | 4818586 - 4820445 | 71364.6 |
| type vi secretion system baseplate subunit tssg | DNR41_24970 | Not Available | Positive | 4820409 - 4821458 | 39103.0 |
| type vi secretion system-associated fha domain protein tagh | DNR41_24975 | Not Available | Positive | 4821475 - 4822755 | 47192.9 |
| type vi secretion system lipoprotein tssj | DNR41_24980 | Not Available | Positive | 4822752 - 4823276 | 19252.9 |
| type vi secretion system baseplate subunit tssk | DNR41_24985 | Not Available | Positive | 4823279 - 4824625 | 49924.4 |
| dotu family type iv/vi secretion system protein | DNR41_24990 | Not Available | Positive | 4824630 - 4825394 | 29417.9 |
| type vi secretion system atpase tssh | DNR41_24995 | Not Available | Positive | 4825404 - 4828163 | 100201.0 |
| type vi secretion system-associated protein tago | DNR41_25000 | Not Available | Positive | 4828160 - 4828903 | 26450.7 |
| type vi secretion system protein tssa | DNR41_25005 | Not Available | Positive | 4828842 - 4830350 | 56392.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





