Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | DNR41_23860 | Not Available | Positive | 4618060 - 4619502 | 51799.6 |
| is1 family transposase | DNR41_23865 | Not Available | Positive | 4619645 - 4619823 | 6643.95 |
| transcriptional regulator | DNR41_23870 | Not Available | Negative | 4619824 - 4619993 | 6551.88 |
| gtpase | DNR41_23875 | Not Available | Negative | 4620196 - 4621080 | 33285.2 |
| hypothetical protein | DNR41_23880 | Not Available | Positive | 4621186 - 4622136 | 36785.8 |
| hypothetical protein | DNR41_23885 | Not Available | Negative | 4622133 - 4622921 | 30963.5 |
| hypothetical protein | DNR41_23890 | Not Available | Positive | 4624018 - 4624254 | 9138.58 |
| inovirus gp2 family protein | DNR41_23895 | Not Available | Positive | 4624613 - 4625353 | 27962.3 |
| hypothetical protein | DNR41_23900 | Not Available | Positive | 4625441 - 4625659 | 8271.66 |
| tonb-dependent receptor | DNR41_23905 | Not Available | Positive | 4626135 - 4628183 | 75295.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





