Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DNR41_23800 | Not Available | Positive | 4606016 - 4607320 | 48392.4 |
| tatd family deoxyribonuclease | DNR41_23805 | Not Available | Positive | 4607317 - 4608042 | 26865.5 |
| hypothetical protein | DNR41_23810 | Not Available | Positive | 4608264 - 4608461 | 7731.16 |
| slatt domain-containing protein | DNR41_23815 | Not Available | Negative | 4608595 - 4609170 | 21852.5 |
| nucleotidyltransferase | DNR41_23820 | Not Available | Negative | 4609178 - 4610506 | 51003.9 |
| is3 family transposase | DNR41_23830 | Not Available | Negative | 4610847 - 4612003 | 45271.7 |
| alcohol dehydrogenase | DNR41_23835 | Not Available | Negative | 4612073 - 4612420 | 12422.8 |
| hypothetical protein | DNR41_23840 | Not Available | Negative | 4612814 - 4613038 | 8457.12 |
| amino acid permease | DNR41_23850 | Not Available | Positive | 4613985 - 4615454 | 53413.7 |
| arginine decarboxylase | DNR41_23855 | Not Available | Positive | 4615559 - 4617928 | 88728.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





