Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | DNR41_23450 | Not Available | Positive | 4553307 - 4553843 | 20892.3 |
| hemolysin expression modulator hha | DNR41_23455 | Not Available | Positive | 4553889 - 4554098 | 8292.97 |
| duf2726 domain-containing protein | DNR41_23460 | Not Available | Positive | 4554136 - 4554726 | 22930.4 |
| transcriptional regulator | DNR41_23465 | Not Available | Positive | 4554966 - 4555226 | 9770.84 |
| replication protein repa | DNR41_23470 | Not Available | Negative | 4555267 - 4555413 | 5428.67 |
| positive regulator of repfic repa1 expression | DNR41_23475 | Not Available | Positive | 4555459 - 4555533 | 2699.38 |
| incfii family plasmid replication initiator repa | DNR41_23480 | Not Available | Positive | 4555514 - 4556383 | 33080.0 |
| replication protein repa4 | DNR41_23490 | Not Available | Negative | 4556955 - 4557086 | 4769.83 |
| is6-like element is26 family transposase | DNR41_23495 | Not Available | Positive | 4557439 - 4558143 | 27754.7 |
| scsc protein | DNR41_23505 | Not Available | Positive | 4558173 - 4558400 | 8025.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





