Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system mating-pair stabilization protein tran | DNR41_23350 | Not Available | Positive | 4531495 - 4533345 | 66727.2 |
| conjugal transfer protein trbe | DNR41_23355 | Not Available | Positive | 4533369 - 4533629 | 9893.11 |
| type-f conjugative transfer system pilin assembly protein traf | DNR41_23360 | Not Available | Positive | 4533592 - 4534365 | 29198.3 |
| conjugal transfer protein trba | DNR41_23365 | Not Available | Positive | 4534379 - 4534720 | 12535.9 |
| toxin arta | DNR41_23370 | Not Available | Negative | 4534701 - 4535036 | 12868.5 |
| type-f conjugative transfer system pilin chaperone traq | DNR41_23375 | Not Available | Positive | 4535117 - 4535401 | 10823.3 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | DNR41_23380 | Not Available | Positive | 4535388 - 4535933 | 20031.3 |
| conjugal transfer protein trbj | DNR41_23385 | Not Available | Positive | 4535830 - 4536210 | 14435.9 |
| conjugal transfer protein trbf | DNR41_23390 | Not Available | Positive | 4536158 - 4536583 | 17152.9 |
| conjugal transfer protein trah | DNR41_23395 | Not Available | Positive | 4536561 - 4537943 | 50551.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





