Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxosome protein tray | DNR41_23250 | Not Available | Positive | 4519078 - 4519305 | 9072.72 |
| type iv conjugative transfer system pilin traa | DNR41_23255 | Not Available | Positive | 4519339 - 4519698 | 12770.4 |
| type iv conjugative transfer system protein tral | DNR41_23260 | Not Available | Positive | 4519713 - 4520024 | 11916.7 |
| type iv conjugative transfer system protein trae | DNR41_23265 | Not Available | Positive | 4520046 - 4520612 | 21239.6 |
| type-f conjugative transfer system secretin trak | DNR41_23270 | Not Available | Positive | 4520656 - 4521327 | 23511.0 |
| conjugal transfer protein trab | DNR41_23275 | Not Available | Positive | 4521327 - 4522754 | 50461.9 |
| conjugal transfer protein trap | DNR41_23280 | Not Available | Positive | 4522744 - 4523334 | 22020.7 |
| duf2689 domain-containing protein | DNR41_23285 | Not Available | Positive | 4523288 - 4523641 | 12853.6 |
| conjugal transfer protein trbg | DNR41_23290 | Not Available | Positive | 4523653 - 4523886 | 8499.04 |
| type iv conjugative transfer system protein trav | DNR41_23295 | Not Available | Positive | 4523883 - 4524398 | 18236.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





