Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase pspe | DNR41_22920 | Not Available | Negative | 4460323 - 4460637 | 11506.0 |
| phage shock protein d | DNR41_22925 | Not Available | Negative | 4460712 - 4460933 | 8042.22 |
| envelope stress response membrane protein pspc | DNR41_22930 | Not Available | Negative | 4460942 - 4461301 | 13545.7 |
| envelope stress response membrane protein pspb | DNR41_22935 | Not Available | Negative | 4461301 - 4461525 | 8763.59 |
| phage shock protein pspa | DNR41_22940 | Not Available | Negative | 4461579 - 4462247 | 25522.4 |
| phage shock protein operon transcriptional activator | DNR41_22945 | Not Available | Positive | 4462413 - 4463390 | 36960.6 |
| duf2543 family protein | DNR41_22955 | Not Available | Positive | 4463817 - 4464062 | 9307.77 |
| hypothetical protein | DNR41_22960 | Not Available | Positive | 4464132 - 4464272 | 4932.99 |
| peptide abc transporter substrate-binding protein sapa | DNR41_22965 | Not Available | Positive | 4464375 - 4466018 | 61543.0 |
| peptide abc transporter permease | DNR41_22970 | Not Available | Positive | 4466015 - 4466980 | 36025.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





