Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | DNR41_22540 | Not Available | Negative | 4395566 - 4396468 | 31447.2 |
| type 1 fimbrial protein | DNR41_22545 | Not Available | Negative | 4396488 - 4396991 | 17385.4 |
| protein fimf | DNR41_22550 | Not Available | Negative | 4397004 - 4397534 | 18700.3 |
| fimbrial biogenesis outer membrane usher protein | DNR41_22555 | Not Available | Negative | 4397544 - 4400180 | 96627.9 |
| molecular chaperone fimc | DNR41_22560 | Not Available | Negative | 4400247 - 4400972 | 26660.5 |
| fimbrin-like protein fimi | DNR41_22565 | Not Available | Negative | 4401009 - 4401548 | 19374.4 |
| type-1 fimbrial protein subunit a | DNR41_22570 | Not Available | Negative | 4401613 - 4402161 | 18171.3 |
| hypothetical protein | DNR41_22575 | Not Available | Positive | 4402383 - 4402562 | 6920.25 |
| type 1 fimbriae regulatory protein fime | DNR41_22580 | Not Available | Negative | 4402641 - 4403237 | 23117.6 |
| integrase | DNR41_22585 | Not Available | Negative | 4403715 - 4404317 | 22975.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





