Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | DNR41_22390 | Not Available | Negative | 4370256 - 4371287 | 38722.0 |
| lps assembly lipoprotein lpte | DNR41_22395 | Not Available | Negative | 4371287 - 4371868 | 21357.8 |
| leucine--trna ligase | DNR41_22400 | Not Available | Negative | 4371883 - 4374465 | 97312.1 |
| zinc ribbon-containing protein | DNR41_22405 | Not Available | Positive | 4374700 - 4375182 | 18798.2 |
| pyrimidine-specific ribonucleoside hydrolase riha | DNR41_22410 | Not Available | Negative | 4375227 - 4376162 | 33911.9 |
| glutamate/aspartate transport atp-binding protein gltl | DNR41_22415 | Not Available | Negative | 4376280 - 4377005 | 26661.7 |
| glutamate abc transporter permease | DNR41_22420 | Not Available | Negative | 4377005 - 4377679 | 24916.2 |
| glutamate abc transporter permease | DNR41_22425 | Not Available | Negative | 4377679 - 4378419 | 27504.3 |
| glutamate/aspartate abc transporter substrate-binding protein | DNR41_22430 | Not Available | Negative | 4378589 - 4379497 | 33336.9 |
| rhomboid family intramembrane serine protease | DNR41_22435 | Not Available | Positive | 4379951 - 4381828 | 67842.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





