Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octanoyltransferase | DNR41_22340 | Not Available | Negative | 4361318 - 4361959 | 23884.0 |
| duf493 family protein | DNR41_22345 | Not Available | Negative | 4362060 - 4362323 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase | DNR41_22350 | Not Available | Negative | 4362433 - 4363644 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | DNR41_22355 | Not Available | Negative | 4363784 - 4364872 | 37584.2 |
| rod shape-determining protein roda | DNR41_22360 | Not Available | Negative | 4364883 - 4365995 | 40492.6 |
| penicillin-binding protein 2 | DNR41_22365 | Not Available | Negative | 4365998 - 4367899 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DNR41_22370 | Not Available | Negative | 4367930 - 4368397 | 17342.1 |
| ribosome silencing factor rsfs | DNR41_22375 | Not Available | Negative | 4368401 - 4368718 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | DNR41_22380 | Not Available | Negative | 4368978 - 4369589 | 23418.8 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | DNR41_22385 | Not Available | Negative | 4369613 - 4370254 | 24561.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





