Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DNR41_22235 | Not Available | Positive | 4344236 - 4344421 | 7044.48 |
| ribonuclease i | DNR41_22240 | Not Available | Negative | 4344478 - 4345284 | 29689.1 |
| anion permease | DNR41_22245 | Not Available | Negative | 4345398 - 4346861 | 53152.7 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | DNR41_22250 | Not Available | Negative | 4346912 - 4347790 | 31664.3 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | DNR41_22255 | Not Available | Negative | 4347765 - 4348316 | 20293.5 |
| citrate lyase subunit alpha | DNR41_22260 | Not Available | Negative | 4348320 - 4349852 | 55164.0 |
| citrate lyase subunit beta | DNR41_22265 | Not Available | Negative | 4349863 - 4350771 | 33111.6 |
| citrate lyase acp | DNR41_22270 | Not Available | Negative | 4350768 - 4351064 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | DNR41_22275 | Not Available | Negative | 4351079 - 4352137 | 40079.5 |
| sensor histidine kinase dpib | DNR41_22280 | Not Available | Positive | 4352516 - 4354174 | 61694.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





