Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system paar protein | DNR41_21985 | Not Available | Positive | 4288119 - 4288403 | 9587.43 |
| methyltransferase | DNR41_21990 | Not Available | Negative | 4288571 - 4288655 | 3386.24 |
| omptin family outer membrane protease ompt | DNR41_21995 | Not Available | Negative | 4288890 - 4289843 | 35539.1 |
| duf4434 family protein | DNR41_22000 | Not Available | Negative | 4290501 - 4291391 | 33005.5 |
| phage receptor | DNR41_22005 | Not Available | Negative | 4291392 - 4294364 | 111387.0 |
| bacteriophage n4 adsorption protein b | DNR41_22010 | Not Available | Negative | 4294351 - 4296588 | 85294.2 |
| cu(+)/ag(+) sensor histidine kinase cuss | DNR41_22015 | Not Available | Negative | 4296738 - 4298180 | 53779.3 |
| dna-binding response regulator | DNR41_22020 | Not Available | Negative | 4298170 - 4298853 | 25396.1 |
| copper transporter | DNR41_22025 | Not Available | Positive | 4298900 - 4299055 | 5859.19 |
| cu(i)/ag(i) efflux rnd transporter outer membrane protein | DNR41_22030 | Not Available | Positive | 4299010 - 4300392 | 50739.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





