Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| collagenase-like protease | DNR41_21865 | Not Available | Positive | 4269593 - 4271554 | 72737.0 |
| duf2554 family protein | DNR41_21870 | Not Available | Negative | 4271646 - 4271876 | 8727.36 |
| plp-dependent aminotransferase family protein | DNR41_21880 | Not Available | Positive | 4272370 - 4273776 | 52912.0 |
| spermidine/putrescine abc transporter substrate-binding protein | DNR41_21885 | Not Available | Positive | 4274021 - 4275166 | 42307.4 |
| abc transporter atp-binding protein | DNR41_21890 | Not Available | Positive | 4275184 - 4276197 | 36943.7 |
| abc transporter permease | DNR41_21895 | Not Available | Positive | 4276198 - 4277139 | 34363.1 |
| abc transporter permease | DNR41_21900 | Not Available | Positive | 4277129 - 4277923 | 28739.5 |
| gamma-aminobutyraldehyde dehydrogenase | DNR41_21905 | Not Available | Positive | 4277945 - 4279369 | 50861.9 |
| stress response membrane protein yncl | DNR41_21910 | Not Available | Negative | 4279466 - 4279561 | 3490.44 |
| hypothetical protein | DNR41_21915 | Not Available | Negative | 4279558 - 4279773 | 8584.48 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





