Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | DNR41_21760 | Not Available | Positive | 4249250 - 4253152 | 148949.0 |
| ydcf family protein | DNR41_21765 | Not Available | Positive | 4253425 - 4254225 | 29635.3 |
| aldehyde dehydrogenase | DNR41_21770 | Not Available | Positive | 4254422 - 4255861 | 52313.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DNR41_21775 | Not Available | Negative | 4255903 - 4256904 | 35777.8 |
| cytochrome b561 | DNR41_21780 | Not Available | Positive | 4257093 - 4257623 | 20183.6 |
| hypothetical protein | DNR41_21785 | Not Available | Positive | 4257868 - 4258041 | 5812.15 |
| hok/gef family protein | DNR41_21790 | Not Available | Negative | 4258114 - 4258254 | 5082.06 |
| lysr family transcriptional regulator | DNR41_21800 | Not Available | Negative | 4258707 - 4259630 | 33388.5 |
| voc family protein | DNR41_21805 | Not Available | Positive | 4259847 - 4261190 | 50995.6 |
| hypothetical protein | DNR41_21810 | Not Available | Negative | 4261187 - 4261384 | 7864.86 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





