Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DNR41_21660 | Not Available | Negative | 4224827 - 4225093 | 9925.61 |
| hypothetical protein | DNR41_21665 | Not Available | Negative | 4225059 - 4225280 | 8345.32 |
| hypothetical protein | DNR41_21670 | Not Available | Negative | 4225210 - 4225428 | 8192.27 |
| universal stress protein uspf | DNR41_21675 | Not Available | Negative | 4225517 - 4225951 | 15959.4 |
| porin omps2 | DNR41_21680 | Not Available | Negative | 4226092 - 4227225 | 41180.9 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DNR41_21685 | Not Available | Negative | 4227591 - 4231115 | 128764.0 |
| duf333 domain-containing protein | DNR41_21690 | Not Available | Positive | 4231389 - 4231655 | 8696.44 |
| heat shock protein hslj | DNR41_21695 | Not Available | Negative | 4231652 - 4232074 | 15133.6 |
| 2-hydroxyacid dehydrogenase | DNR41_21700 | Not Available | Negative | 4232185 - 4233174 | 36522.8 |
| ydbh family protein | DNR41_21705 | Not Available | Positive | 4233382 - 4236021 | 96708.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





