Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | DNR41_21605 | Not Available | Positive | 4214487 - 4215515 | 37719.2 |
| mfs transporter | DNR41_21610 | Not Available | Positive | 4215515 - 4217026 | 55554.7 |
| dna endonuclease smra | DNR41_21615 | Not Available | Positive | 4217221 - 4217784 | 21545.8 |
| diguanylate cyclase | DNR41_21620 | Not Available | Negative | 4217805 - 4219037 | 46482.9 |
| zinc transporter zntb | DNR41_21625 | Not Available | Positive | 4219292 - 4220275 | 36614.3 |
| hypothetical protein | DNR41_21630 | Not Available | Positive | 4220550 - 4220723 | 6427.87 |
| atp-dependent rna helicase dbpa | DNR41_21635 | Not Available | Positive | 4220753 - 4222126 | 49318.9 |
| trna 2-thiocytidine(32) synthetase ttca | DNR41_21640 | Not Available | Negative | 4222255 - 4223190 | 35505.9 |
| integrase | DNR41_21645 | Not Available | Negative | 4223242 - 4223493 | 9680.6 |
| hypothetical protein | DNR41_21655 | Not Available | Positive | 4224259 - 4224438 | 6771.76 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





