Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DNR41_21550 | Not Available | Negative | 4204939 - 4205859 | 33551.2 |
| lysr family transcriptional regulator | DNR41_21555 | Not Available | Positive | 4205997 - 4206896 | 33395.7 |
| peptide abc transporter substrate-binding protein | DNR41_21560 | Not Available | Positive | 4207233 - 4208846 | 59903.3 |
| mechanosensitive ion channel family protein | DNR41_21565 | Not Available | Negative | 4208897 - 4209928 | 38811.9 |
| duf2534 family protein | DNR41_21570 | Not Available | Positive | 4210172 - 4210429 | 9339.82 |
| universal stress protein e | DNR41_21575 | Not Available | Negative | 4210479 - 4211429 | 35708.9 |
| transcriptional regulator fnr | DNR41_21580 | Not Available | Negative | 4211581 - 4212333 | 27968.9 |
| methylated-dna--protein-cysteine methyltransferase | DNR41_21585 | Not Available | Negative | 4212528 - 4213043 | 19180.2 |
| pump protein | DNR41_21590 | Not Available | Negative | 4213054 - 4213245 | 7277.32 |
| arac family transcriptional regulator | DNR41_21600 | Not Available | Negative | 4213575 - 4214390 | 30556.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





