Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein arir | DNR41_21350 | Not Available | Negative | 4167457 - 4167723 | 9696.56 |
| two-component-system connector protein ymga | DNR41_21355 | Not Available | Negative | 4167752 - 4168024 | 10318.5 |
| two-component-system connector protein ycgz | DNR41_21360 | Not Available | Negative | 4168067 - 4168303 | 8694.37 |
| eal domain-containing protein | DNR41_21365 | Not Available | Positive | 4168617 - 4169828 | 45347.6 |
| helix-turn-helix-type transcriptional regulator | DNR41_21370 | Not Available | Positive | 4170033 - 4170764 | 28262.2 |
| duf1398 domain-containing protein | DNR41_21375 | Not Available | Positive | 4170985 - 4171389 | 15823.0 |
| isocitrate dehydrogenase | DNR41_21380 | Not Available | Negative | 4171651 - 4171803 | 5511.76 |
| hypothetical protein | DNR41_21385 | Not Available | Negative | 4171997 - 4172152 | 5916.19 |
| hypothetical protein | DNR41_21390 | Not Available | Negative | 4172275 - 4173045 | 30149.2 |
| hypothetical protein | DNR41_21395 | Not Available | Negative | 4173169 - 4173453 | 10622.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





