Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase molybdenum cofactor assembly chaperone narj | DNR41_20950 | Not Available | Negative | 4099342 - 4100052 | 26450.3 |
| nitrate reductase subunit beta | DNR41_20955 | Not Available | Negative | 4100049 - 4101587 | 58083.6 |
| nitrate/nitrite transporter nark | DNR41_20965 | Not Available | Negative | 4105720 - 4107111 | 49696.3 |
| hypothetical protein | DNR41_20970 | Not Available | Negative | 4107206 - 4107424 | 8643.32 |
| nitrate/nitrite two-component system sensor histidine kinase narx | DNR41_20975 | Not Available | Positive | 4107450 - 4109246 | 67130.1 |
| dna-binding response regulator | DNR41_20980 | Not Available | Positive | 4109239 - 4109889 | 23958.3 |
| ycho family inverse autotransporter domain-containing protein | DNR41_20985 | Not Available | Negative | 4109890 - 4111284 | 52092.6 |
| hypothetical protein | DNR41_20990 | Not Available | Positive | 4111469 - 4111822 | 12720.6 |
| glutathione-specific gamma-glutamylcyclotransferase | DNR41_20995 | Not Available | Negative | 4111866 - 4112561 | 25543.7 |
| cation transport regulator chab | DNR41_21000 | Not Available | Negative | 4112719 - 4112949 | 8945.18 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





