Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein h-ns | DNR41_20895 | Not Available | Positive | 4091480 - 4091893 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase | DNR41_20900 | Not Available | Negative | 4092037 - 4092945 | 32944.2 |
| two-component system response regulator rssb | DNR41_20905 | Not Available | Negative | 4093147 - 4094160 | 37226.4 |
| patatin family protein | DNR41_20910 | Not Available | Negative | 4094252 - 4095157 | 33041.0 |
| ychj family protein | DNR41_20915 | Not Available | Positive | 4095270 - 4095728 | 16901.2 |
| formyltetrahydrofolate deformylase | DNR41_20920 | Not Available | Positive | 4095778 - 4096620 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 4096780 - 4096864 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4096898 - 4096982 | Not Available |
| is4 family transposase | DNR41_20940 | Not Available | Positive | 4097413 - 4098612 | 45856.9 |
| respiratory nitrate reductase subunit gamma | DNR41_20945 | Not Available | Negative | 4098665 - 4099342 | 25484.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





