Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase a | DNR41_20840 | Not Available | Positive | 4076801 - 4078261 | 54825.6 |
| duf440 family protein | DNR41_20845 | Not Available | Positive | 4078296 - 4078625 | 12672.7 |
| oligopeptide abc transporter atp-binding protein oppf | DNR41_20850 | Not Available | Negative | 4078678 - 4079682 | 37195.8 |
| oligopeptide abc transporter atp-binding protein oppd | DNR41_20855 | Not Available | Negative | 4079679 - 4080692 | 37153.7 |
| oligopeptide abc transporter permease oppc | DNR41_20860 | Not Available | Negative | 4080704 - 4081612 | 33034.0 |
| peptide abc transporter permease | DNR41_20865 | Not Available | Negative | 4081627 - 4082547 | 33431.2 |
| oligopeptide abc transporter substrate-binding protein oppa | DNR41_20870 | Not Available | Negative | 4082633 - 4084264 | 60979.1 |
| marc family protein | DNR41_20875 | Not Available | Negative | 4085002 - 4085649 | 23488.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | DNR41_20880 | Not Available | Positive | 4086126 - 4088801 | 96162.5 |
| thymidine kinase | DNR41_20890 | Not Available | Negative | 4090259 - 4090876 | 23400.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





