Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase, biosynthetic | DNR41_20720 | Not Available | Negative | 4060488 - 4062032 | 56187.4 |
| dihydroxy-acid dehydratase | DNR41_20725 | Not Available | Negative | 4062035 - 4063885 | 65548.4 |
| branched-chain-amino-acid transaminase | DNR41_20730 | Not Available | Negative | 4063950 - 4064879 | 34076.5 |
| acetolactate synthase isozyme 2 small subunit | DNR41_20735 | Not Available | Negative | 4064899 - 4065162 | 9703.74 |
| acetolactate synthase 2 catalytic subunit | DNR41_20740 | Not Available | Negative | 4065159 - 4066805 | 59160.1 |
| hypothetical protein | DNR41_20745 | Not Available | Negative | 4066808 - 4066858 | 1910.25 |
| ilvgmeda operon leader peptide | DNR41_20750 | Not Available | Negative | 4066945 - 4067043 | 3231.32 |
| atp-dependent protease | DNR41_20760 | Not Available | Positive | 4067396 - 4068916 | 55268.7 |
| duf413 domain-containing protein | DNR41_20765 | Not Available | Negative | 4068941 - 4069279 | 13134.2 |
| transcriptional regulator | DNR41_20770 | Not Available | Positive | 4069398 - 4070237 | 31792.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





