Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna amidotransferase | DNR41_20365 | Not Available | Positive | 3988614 - 3989003 | 14311.2 |
| cytosine permease | DNR41_20370 | Not Available | Positive | 3989029 - 3990252 | 42554.3 |
| lysr family transcriptional regulator | DNR41_20375 | Not Available | Positive | 3990330 - 3991235 | 33855.1 |
| murr/rpir family transcriptional regulator | DNR41_20380 | Not Available | Positive | 3991436 - 3992281 | 31487.9 |
| transketolase | DNR41_20385 | Not Available | Negative | 3992311 - 3994308 | 72978.7 |
| pts n-acetylglucosamine transporter subunit iicb | DNR41_20390 | Not Available | Negative | 3994359 - 3995867 | 54523.7 |
| sis domain-containing protein | DNR41_20395 | Not Available | Negative | 3995909 - 3996466 | 20375.7 |
| type vi secretion system tube protein hcp | DNR41_20400 | Not Available | Positive | 3996951 - 3997244 | 10885.8 |
| colicin | DNR41_20405 | Not Available | Positive | 3997655 - 3998083 | 16297.0 |
| marr family transcriptional regulator | DNR41_20410 | Not Available | Positive | 3998080 - 3998337 | 9675.79 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





