Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase | DNR41_20215 | Not Available | Negative | 3957534 - 3958079 | 21227.4 |
| trk system potassium transporter trkh | DNR41_20220 | Not Available | Negative | 3958091 - 3959542 | 52948.8 |
| impact family protein | DNR41_20225 | Not Available | Negative | 3959581 - 3960195 | 21690.0 |
| xaa-pro dipeptidase | DNR41_20230 | Not Available | Negative | 3960195 - 3961526 | 50191.9 |
| fatty acid oxidation complex subunit alpha fadb | DNR41_20235 | Not Available | Positive | 3961716 - 3963905 | 79535.5 |
| acetyl-coa c-acyltransferase fada | DNR41_20240 | Not Available | Positive | 3963915 - 3965078 | 40825.6 |
| nad(p)h-flavin reductase | DNR41_20245 | Not Available | Negative | 3965361 - 3966062 | 26243.5 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | DNR41_20250 | Not Available | Negative | 3966108 - 3967601 | 55606.8 |
| transcription/translation regulatory transformer protein rfah | DNR41_20255 | Not Available | Positive | 3967768 - 3968256 | 18357.3 |
| 3'-5' ssdna/rna exonuclease tatd | DNR41_20260 | Not Available | Negative | 3968253 - 3969035 | 29036.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





