Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DNR41_20105 | Not Available | Negative | 3937838 - 3938290 | 17429.0 |
| type ii toxin-antitoxin system yafo family toxin | DNR41_20110 | Not Available | Negative | 3938300 - 3938698 | 15414.7 |
| antitoxin yafn | DNR41_20115 | Not Available | Negative | 3938701 - 3938994 | 11234.4 |
| dna polymerase iv | DNR41_20120 | Not Available | Negative | 3939046 - 3940101 | 39504.1 |
| putative lateral flagellar export/assembly protein lafu | DNR41_20125 | Not Available | Negative | 3940172 - 3940957 | 28891.0 |
| flagellar type iii secretion system protein flha | DNR41_20130 | Not Available | Positive | 3940902 - 3942641 | 63441.6 |
| transposase | DNR41_20135 | Not Available | Negative | 3942961 - 3943458 | 19998.8 |
| peptidoglycan endopeptidase | DNR41_20140 | Not Available | Negative | 3943634 - 3944392 | 29322.2 |
| transpeptidase | DNR41_20145 | Not Available | Positive | 3944695 - 3945435 | 28022.8 |
| class ii glutamine amidotransferase | DNR41_20150 | Not Available | Negative | 3945406 - 3946173 | 28598.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





