Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DNR41_19400 | Not Available | Negative | 3801662 - 3801844 | 7079.92 |
| hypothetical protein | DNR41_19405 | Not Available | Negative | 3801883 - 3802161 | 11130.1 |
| hypothetical protein | DNR41_19410 | Not Available | Negative | 3802223 - 3802435 | 8267.17 |
| helix-turn-helix domain-containing protein | DNR41_19415 | Not Available | Negative | 3802520 - 3802810 | 10847.1 |
| type ii toxin-antitoxin system rele/pare family toxin | DNR41_19420 | Not Available | Negative | 3802811 - 3803122 | 12203.9 |
| alpha/beta hydrolase | DNR41_19425 | Not Available | Positive | 3803351 - 3804259 | 33622.2 |
| gnat family n-acetyltransferase | DNR41_19430 | Not Available | Negative | 3804323 - 3805312 | 37096.5 |
| d-aminoacyl-trna deacylase | DNR41_19435 | Not Available | Negative | 3805309 - 3805746 | 15951.0 |
| virulence factor brkb family protein | DNR41_19440 | Not Available | Negative | 3805743 - 3806615 | 32840.7 |
| glucose-1-phosphatase | DNR41_19445 | Not Available | Negative | 3806609 - 3807208 | 22761.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





