Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | DNR41_19345 | Not Available | Positive | 3791624 - 3791938 | 12190.3 |
| porin | DNR41_19350 | Not Available | Negative | 3791979 - 3793373 | 52042.4 |
| sulfurtransferase fdhd | DNR41_19360 | Not Available | Negative | 3794503 - 3795336 | 30533.8 |
| hypothetical protein | DNR41_19365 | Not Available | Negative | 3795272 - 3795526 | 9595.78 |
| sulfate abc transporter substrate-binding protein | DNR41_19370 | Not Available | Positive | 3795530 - 3796117 | 21369.5 |
| formate dehydrogenase-n subunit alpha | DNR41_19375 | Not Available | Positive | 3796166 - 3798580 | 89561.1 |
| formate dehydrogenase-o iron-sulfur subunit | DNR41_19380 | Not Available | Positive | 3798593 - 3799495 | 33102.1 |
| formate dehydrogenase cytochrome b556(fdo) subunit | DNR41_19385 | Not Available | Positive | 3799492 - 3800127 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | DNR41_19390 | Not Available | Positive | 3800124 - 3801053 | 34720.6 |
| ribbon-helix-helix protein, copg family | DNR41_19395 | Not Available | Negative | 3801269 - 3801481 | 8276.04 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





