Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-n-hydroxylaminopurine resistance protein | DNR41_19295 | Not Available | Negative | 3781740 - 3782414 | 25311.0 |
| 2-keto-3-deoxygluconate permease | DNR41_19300 | Not Available | Negative | 3782563 - 3783546 | 33671.4 |
| 2-keto-3-deoxygluconate permease | DNR41_19305 | Not Available | Negative | 3783524 - 3783631 | 3694.3 |
| superoxide dismutase | DNR41_19310 | Not Available | Negative | 3783806 - 3784426 | 23065.1 |
| rhamnose/proton symporter rhat | DNR41_19315 | Not Available | Positive | 3784711 - 3785745 | 37286.1 |
| hth-type transcriptional activator rhar | DNR41_19320 | Not Available | Negative | 3785742 - 3786680 | 35637.3 |
| transcriptional activator rhas | DNR41_19325 | Not Available | Negative | 3786664 - 3787500 | 32404.2 |
| rhamnulokinase | DNR41_19330 | Not Available | Positive | 3787788 - 3789257 | 54079.1 |
| l-rhamnose isomerase | DNR41_19335 | Not Available | Positive | 3789254 - 3790513 | 47310.1 |
| rhamnulose-1-phosphate aldolase | DNR41_19340 | Not Available | Positive | 3790790 - 3791614 | 30161.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





