Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1107 domain-containing protein | DNR41_18640 | Not Available | Positive | 3629727 - 3629933 | 8072.24 |
| hlyc/corc family transporter | DNR41_18645 | Not Available | Negative | 3630011 - 3631354 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase | DNR41_18650 | Not Available | Negative | 3631677 - 3632315 | 23335.3 |
| hypothetical protein | DNR41_18655 | Not Available | Positive | 3632372 - 3632551 | 6803.32 |
| autotransporter assembly complex protein tama | DNR41_18660 | Not Available | Positive | 3632521 - 3634254 | 64845.7 |
| autotransporter assembly complex protein tamb | DNR41_18665 | Not Available | Positive | 3634251 - 3638030 | 136784.0 |
| gamma-glutamylcyclotransferase ytfp | DNR41_18670 | Not Available | Positive | 3638033 - 3638374 | 12867.2 |
| inorganic pyrophosphatase | DNR41_18675 | Not Available | Negative | 3638754 - 3639284 | 19732.6 |
| sugar abc transporter substrate-binding protein | DNR41_18680 | Not Available | Positive | 3639594 - 3640550 | 34328.5 |
| sugar abc transporter atp-binding protein | DNR41_18685 | Not Available | Positive | 3640690 - 3642192 | 55289.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





