Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DNR41_18540 | Not Available | Negative | 3608982 - 3609179 | 7853.65 |
| xre family transcriptional regulator | DNR41_18545 | Not Available | Positive | 3609273 - 3609764 | 17674.4 |
| type ii toxin-antitoxin system hipa family toxin | DNR41_18550 | Not Available | Positive | 3609767 - 3611035 | 47859.8 |
| mfs transporter | DNR41_18555 | Not Available | Negative | 3611178 - 3612455 | 46845.8 |
| fad-binding protein | DNR41_18560 | Not Available | Negative | 3612548 - 3614620 | 75528.1 |
| acyl coa:acetate/3-ketoacid coa transferase | DNR41_18565 | Not Available | Negative | 3614617 - 3616158 | 55605.7 |
| enoyl-coa hydratase/isomerase family protein | DNR41_18570 | Not Available | Negative | 3616168 - 3616944 | 28509.4 |
| sugar phosphate isomerase/epimerase | DNR41_18575 | Not Available | Negative | 3616947 - 3617795 | 31551.2 |
| 3-ketoacyl-acp reductase | DNR41_18580 | Not Available | Negative | 3617805 - 3618596 | 28466.4 |
| tetr/acrr family transcriptional regulator | DNR41_18585 | Not Available | Positive | 3618808 - 3619455 | 24783.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





