Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1116 domain-containing protein | DNR41_18080 | Not Available | Positive | 3533993 - 3535252 | 44983.7 |
| duf2877 domain-containing protein | DNR41_18085 | Not Available | Positive | 3535263 - 3536078 | 29667.9 |
| carbamate kinase | DNR41_18090 | Not Available | Positive | 3536075 - 3536968 | 31632.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DNR41_18095 | Not Available | Negative | 3537121 - 3538188 | 39552.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DNR41_18100 | Not Available | Negative | 3538185 - 3538694 | 17795.4 |
| hypothetical protein | DNR41_18110 | Not Available | Negative | 3538790 - 3539119 | 12259.1 |
| udp-2,3-diacylglucosamine hydrolase | DNR41_18115 | Not Available | Negative | 3539230 - 3539952 | 26876.6 |
| peptidyl-prolyl cis-trans isomerase | DNR41_18120 | Not Available | Negative | 3539955 - 3540449 | 18154.5 |
| cysteine--trna ligase | DNR41_18125 | Not Available | Positive | 3540623 - 3542008 | 52186.9 |
| metal-dependent hydrolase | DNR41_18130 | Not Available | Negative | 3542044 - 3542565 | 19469.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





