Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DNR41_17620 | Not Available | Negative | 3442701 - 3443279 | 20951.3 |
| polymerase | DNR41_17625 | Not Available | Negative | 3443341 - 3443460 | 4789.67 |
| protein bola | DNR41_17630 | Not Available | Positive | 3443584 - 3443901 | 11994.3 |
| hypothetical protein | DNR41_17635 | Not Available | Positive | 3443835 - 3444098 | 10015.4 |
| trigger factor | DNR41_17640 | Not Available | Positive | 3444245 - 3445534 | 47868.1 |
| atp-dependent clp protease proteolytic subunit | DNR41_17645 | Not Available | Positive | 3445789 - 3446412 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | DNR41_17650 | Not Available | Positive | 3446538 - 3447812 | 46358.7 |
| endopeptidase la | DNR41_17655 | Not Available | Positive | 3448000 - 3450354 | 87442.4 |
| dna-binding protein hu-beta | DNR41_17660 | Not Available | Positive | 3450563 - 3450835 | 9226.08 |
| peptidyl-prolyl cis-trans isomerase | DNR41_17665 | Not Available | Positive | 3451027 - 3452898 | 68153.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





