Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | DNR41_13725 | Not Available | Positive | 2664059 - 2665630 | 57287.1 |
| 3-isopropylmalate dehydrogenase | DNR41_13730 | Not Available | Positive | 2665630 - 2666721 | 39503.2 |
| 3-isopropylmalate dehydratase large subunit | DNR41_13735 | Not Available | Positive | 2666724 - 2668124 | 49898.8 |
| 3-isopropylmalate dehydratase small subunit | DNR41_13740 | Not Available | Positive | 2668135 - 2668740 | 22604.8 |
| glucose uptake inhibitor sgrt | DNR41_13745 | Not Available | Negative | 2668848 - 2668979 | 5382.47 |
| transcriptional regulator | DNR41_13750 | Not Available | Positive | 2669068 - 2670723 | 64006.8 |
| thiamine abc transporter substrate binding subunit | DNR41_13755 | Not Available | Positive | 2670887 - 2671870 | 36323.4 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DNR41_13760 | Not Available | Positive | 2671846 - 2673456 | 59473.6 |
| thiamine import atp-binding protein thiq | DNR41_13765 | Not Available | Positive | 2673440 - 2674138 | 25089.8 |
| deda family protein | DNR41_13770 | Not Available | Negative | 2674252 - 2675016 | 28302.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





